HCSGD entry for LINC00540

1. General information

Official gene symbolLINC00540
Entrez ID100506622
Gene full namelong intergenic non-protein coding RNA 540
Other gene symbols
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in Literature mining network.

3. Gene ontology annotation

Not in the Gene ontology

4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.48790582420.94801982830.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0289231444
GSE13712_SHEARUp0.3424119969
GSE13712_STATICUp0.0712409158
GSE19018Up0.1767323713
GSE19899_A1Down-0.0114571569
GSE19899_A2Down-0.1777800775
PubMed_21979375_A1Up0.2249182455
PubMed_21979375_A2Up0.2734083610
GSE35957Up0.1774918780
GSE36640Up0.1042959631
GSE54402Down-0.1198146486
GSE9593Down-0.0293509565
GSE43922--
GSE24585--
GSE37065--
GSE28863_A1Up0.0327140995
GSE28863_A2Down-0.0111822946
GSE28863_A3Up0.1318199804
GSE28863_A4Up0.0429113361
GSE48662--

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.