HCSGD entry for TNIP1
1. General information
| Official gene symbol | TNIP1 |
|---|---|
| Entrez ID | 10318 |
| Gene full name | TNFAIP3 interacting protein 1 |
| Other gene symbols | ABIN-1 NAF1 VAN nip40-1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0002755 | MyD88-dependent toll-like receptor signaling pathway | ISS | biological_process |
| GO:0004843 | Ubiquitin-specific protease activity | IDA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005622 | Intracellular | TAS | cellular_component |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005737 | Cytoplasm | IDA IEA | cellular_component |
| GO:0006412 | Translation | TAS | biological_process |
| GO:0006952 | Defense response | TAS | biological_process |
| GO:0006954 | Inflammatory response | IEA | biological_process |
| GO:0007159 | Leukocyte cell-cell adhesion | IMP | biological_process |
| GO:0009101 | Glycoprotein biosynthetic process | IDA | biological_process |
| GO:0043124 | Negative regulation of I-kappaB kinase/NF-kappaB signaling | IDA | biological_process |
| GO:0045071 | Negative regulation of viral genome replication | TAS | biological_process |
| GO:0045944 | Positive regulation of transcription from RNA polymerase II promoter | ISS | biological_process |
| GO:0050729 | Positive regulation of inflammatory response | ISS | biological_process |
| GO:0051019 | Mitogen-activated protein kinase binding | IDA | molecular_function |
| GO:0070373 | Negative regulation of ERK1 and ERK2 cascade | IDA | biological_process |
| GO:0085032 | Modulation by symbiont of host I-kappaB kinase/NF-kappaB cascade | IDA | biological_process |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0027154135 | 0.9933823411 | 0.1401419608 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2778423587 |
| GSE13712_SHEAR | Down | -0.0887702050 |
| GSE13712_STATIC | Up | 0.0401943923 |
| GSE19018 | Up | 0.9860975741 |
| GSE19899_A1 | Up | 0.3089167107 |
| GSE19899_A2 | Up | 1.4906025801 |
| PubMed_21979375_A1 | Up | 1.6411783814 |
| PubMed_21979375_A2 | Up | 1.1722612349 |
| GSE35957 | Up | 0.5296062759 |
| GSE36640 | Up | 0.9181442219 |
| GSE54402 | Up | 0.3503298711 |
| GSE9593 | Up | 0.2499778739 |
| GSE43922 | Up | 0.6008955224 |
| GSE24585 | Down | -0.1694977492 |
| GSE37065 | Up | 0.2542839196 |
| GSE28863_A1 | Up | 0.0366476129 |
| GSE28863_A2 | Up | 0.2634341506 |
| GSE28863_A3 | Up | 0.2757629043 |
| GSE28863_A4 | Down | -0.1620599181 |
| GSE48662 | Up | 0.1545903923 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-221-3p | MIMAT0000278 | MIRT024151 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-324-3p | MIMAT0000762 | MIRT042899 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-181a-5p | MIMAT0000256 | MIRT047340 | CLASH | Functional MTI (Weak) | 23622248 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
