HCSGD entry for SMYD5

1. General information

Official gene symbolSMYD5
Entrez ID10322
Gene full nameSMYD family member 5
Other gene symbolsNN8-4AG RAI15 RRG1 ZMYND23
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0003674Molecular_functionNDmolecular_function
GO:0005575Cellular_componentNDcellular_component
GO:0008150Biological_processNDbiological_process
GO:0008168Methyltransferase activityIEAmolecular_function
GO:0046872Metal ion bindingIEAmolecular_function
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.24689189240.28226839790.93497387431.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.1803385853
GSE13712_SHEARUp0.3384923018
GSE13712_STATICUp0.2946457758
GSE19018Down-0.1475783750
GSE19899_A1Up0.0025430924
GSE19899_A2Up0.1523400529
PubMed_21979375_A1Up0.5152612450
PubMed_21979375_A2Up1.7972060045
GSE35957Down-0.2029239542
GSE36640Down-0.3571659352
GSE54402Up0.0879197301
GSE9593Down-0.4410575159
GSE43922Down-0.0283026313
GSE24585Down-0.9125476087
GSE37065Down-0.1662122371
GSE28863_A1--
GSE28863_A2--
GSE28863_A3--
GSE28863_A4--
GSE48662Up0.1380312252

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-125b-5pMIMAT0000423MIRT045908CLASHFunctional MTI (Weak)23622248
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.