HCSGD entry for SEPT9
1. General information
| Official gene symbol | SEPT9 |
|---|---|
| Entrez ID | 10801 |
| Gene full name | septin 9 |
| Other gene symbols | AF17q25 MSF MSF1 NAPB PNUTL4 SINT1 SeptD1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001725 | Stress fiber | IDA | cellular_component |
| GO:0003924 | GTPase activity | TAS | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005525 | GTP binding | IEA | molecular_function |
| GO:0005737 | Cytoplasm | TAS | cellular_component |
| GO:0005874 | Microtubule | IDA | cellular_component |
| GO:0006184 | GTP catabolic process | TAS | biological_process |
| GO:0007049 | Cell cycle | IEA | biological_process |
| GO:0008152 | Metabolic process | TAS | biological_process |
| GO:0015629 | Actin cytoskeleton | IDA | cellular_component |
| GO:0031105 | Septin complex | IEA | cellular_component |
| GO:0048471 | Perinuclear region of cytoplasm | IDA | cellular_component |
| GO:0051291 | Protein heterooligomerization | IDA | biological_process |
| GO:0051301 | Cell division | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6070309487 | 0.1201568253 | 0.9999902473 | 0.6659607917 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1339914488 |
| GSE13712_SHEAR | Up | 0.1684847398 |
| GSE13712_STATIC | Up | 0.3380451214 |
| GSE19018 | Up | 0.3447163785 |
| GSE19899_A1 | Down | -0.3815358534 |
| GSE19899_A2 | Down | -0.4988985561 |
| PubMed_21979375_A1 | Down | -0.3779076096 |
| PubMed_21979375_A2 | Down | -0.3880452641 |
| GSE35957 | Down | -0.0683316093 |
| GSE36640 | Down | -0.5460030464 |
| GSE54402 | Down | -0.3491862219 |
| GSE9593 | Up | 0.0423247215 |
| GSE43922 | Down | -0.4391803150 |
| GSE24585 | Up | 0.4603279656 |
| GSE37065 | Down | -0.2129047249 |
| GSE28863_A1 | Up | 0.1715419004 |
| GSE28863_A2 | Up | 0.1990753409 |
| GSE28863_A3 | Down | -0.0181009069 |
| GSE28863_A4 | Up | 0.0299749582 |
| GSE48662 | Up | 0.2930424454 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT022251 | Proteomics;Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-186-5p | MIMAT0000456 | MIRT045022 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-10a-5p | MIMAT0000253 | MIRT047535 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
