HCSGD entry for CAPN11
1. General information
| Official gene symbol | CAPN11 |
|---|---|
| Entrez ID | 11131 |
| Gene full name | calpain 11 |
| Other gene symbols | calpain11 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001669 | Acrosomal vesicle | IEA | cellular_component |
| GO:0004198 | Calcium-dependent cysteine-type endopeptidase activity | IEA | molecular_function |
| GO:0005509 | Calcium ion binding | IEA | molecular_function |
| GO:0005622 | Intracellular | IEA | cellular_component |
| GO:0006508 | Proteolysis | IEA | biological_process |
| GO:0008233 | Peptidase activity | TAS | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8346247939 | 0.6392844573 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0358159558 |
| GSE13712_SHEAR | Down | -0.2959085471 |
| GSE13712_STATIC | Up | 0.0229498395 |
| GSE19018 | Up | 0.1060865639 |
| GSE19899_A1 | Down | -0.1019662163 |
| GSE19899_A2 | Down | -0.0977273099 |
| PubMed_21979375_A1 | Down | -0.1196254685 |
| PubMed_21979375_A2 | Down | -0.0609874327 |
| GSE35957 | Up | 0.0853859661 |
| GSE36640 | Down | -0.0375018426 |
| GSE54402 | Up | 0.0601578533 |
| GSE9593 | Up | 0.0645264847 |
| GSE43922 | Up | 0.0121562905 |
| GSE24585 | Up | 0.0983049619 |
| GSE37065 | Up | 0.0180185918 |
| GSE28863_A1 | Down | -0.1325827013 |
| GSE28863_A2 | Down | -0.0997201898 |
| GSE28863_A3 | Up | 0.1291656591 |
| GSE28863_A4 | Up | 0.1080098498 |
| GSE48662 | Up | 0.0010347374 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT016936 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT022184 | Microarray | Functional MTI (Weak) | 18668037 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
