HCSGD entry for KCTD12
1. General information
| Official gene symbol | KCTD12 |
|---|---|
| Entrez ID | 115207 |
| Gene full name | potassium channel tetramerisation domain containing 12 |
| Other gene symbols | C13orf2 PFET1 PFETIN |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0030054 | Cell junction | IEA | cellular_component |
| GO:0042734 | Presynaptic membrane | IEA | cellular_component |
| GO:0045211 | Postsynaptic membrane | IEA | cellular_component |
| GO:0051260 | Protein homooligomerization | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0245274154 | 0.0190622355 | 0.3698202626 | 0.2707429570 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 1.1575735020 |
| GSE13712_SHEAR | Down | -1.1614892867 |
| GSE13712_STATIC | Down | -1.0292063071 |
| GSE19018 | Down | -3.0079416896 |
| GSE19899_A1 | Up | 1.0656018294 |
| GSE19899_A2 | Up | 0.9974333926 |
| PubMed_21979375_A1 | Up | 1.4596412435 |
| PubMed_21979375_A2 | Up | 1.8198614923 |
| GSE35957 | Down | -0.8335725955 |
| GSE36640 | Up | 1.0016077394 |
| GSE54402 | Down | -0.1418154728 |
| GSE9593 | Down | -1.0318493212 |
| GSE43922 | Up | 0.2379138808 |
| GSE24585 | Down | -0.6275561713 |
| GSE37065 | Down | -0.2815501801 |
| GSE28863_A1 | Down | -0.0785512692 |
| GSE28863_A2 | Down | -0.0104347825 |
| GSE28863_A3 | Up | 0.2840241602 |
| GSE28863_A4 | Up | 0.0327617703 |
| GSE48662 | Up | 0.1891099024 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT019041 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-142-3p | MIMAT0000434 | MIRT021600 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-215-5p | MIMAT0000272 | MIRT024442 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026816 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT032456 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-454-3p | MIMAT0003885 | MIRT039219 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-186-5p | MIMAT0000456 | MIRT045093 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-30d-5p | MIMAT0000245 | MIRT047814 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-22-3p | MIMAT0000077 | MIRT050459 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
