HCSGD entry for HMGB4

1. General information

Official gene symbolHMGB4
Entrez ID127540
Gene full namehigh mobility group box 4
Other gene symbolsdJ1007G16.5
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0003677DNA bindingIEAmolecular_function
GO:0005634NucleusIEAcellular_component
GO:0005694ChromosomeIEAcellular_component
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.81939933510.55570972230.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0305770583
GSE13712_SHEARDown-0.1466581572
GSE13712_STATICUp0.0244440359
GSE19018Up0.1536299764
GSE19899_A1Down-0.0130314152
GSE19899_A2Down-0.2309875406
PubMed_21979375_A1Up0.1329714133
PubMed_21979375_A2Down-0.3752795966
GSE35957Up0.0566831848
GSE36640Up0.0001958345
GSE54402Up0.0866239342
GSE9593Down-0.1689486514
GSE43922Up0.0162913480
GSE24585Up0.2297601223
GSE37065Down-0.0119229603
GSE28863_A1Down-0.0095555370
GSE28863_A2Down-0.1579282597
GSE28863_A3Up0.2295695379
GSE28863_A4Down-0.0299040916
GSE48662Down-0.0190148991

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.