HCSGD entry for TAF8
1. General information
| Official gene symbol | TAF8 |
|---|---|
| Entrez ID | 129685 |
| Gene full name | TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa |
| Other gene symbols | 43 II TAF TAFII-43 TAFII43 TBN |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001833 | Inner cell mass cell proliferation | IEA | biological_process |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005669 | Transcription factor TFIID complex | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0030154 | Cell differentiation | IEA | biological_process |
| GO:0045598 | Regulation of fat cell differentiation | IDA | biological_process |
| GO:0045893 | Positive regulation of transcription, DNA-templated | IDA | biological_process |
| GO:0046982 | Protein heterodimerization activity | IEA | molecular_function |
| GO:0048471 | Perinuclear region of cytoplasm | IDA | cellular_component |
| GO:0051457 | Maintenance of protein location in nucleus | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2696555640 | 0.8253568443 | 0.9667790821 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0203197473 |
| GSE13712_SHEAR | Up | 0.0177360980 |
| GSE13712_STATIC | Down | -0.1189698044 |
| GSE19018 | Up | 0.0449587153 |
| GSE19899_A1 | Up | 0.0416591493 |
| GSE19899_A2 | Up | 0.2942935924 |
| PubMed_21979375_A1 | Down | -0.2248802503 |
| PubMed_21979375_A2 | Up | 0.0784408833 |
| GSE35957 | Down | -0.2454661065 |
| GSE36640 | Down | -0.3143366728 |
| GSE54402 | Up | 0.2078396447 |
| GSE9593 | Down | -0.1080198320 |
| GSE43922 | Up | 0.1614001360 |
| GSE24585 | Down | -0.0841287117 |
| GSE37065 | Up | 0.0449236485 |
| GSE28863_A1 | Up | 0.3692839791 |
| GSE28863_A2 | Up | 0.4109393602 |
| GSE28863_A3 | Up | 0.3995792768 |
| GSE28863_A4 | Down | -0.1881097326 |
| GSE48662 | Up | 0.2683843143 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017151 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-93-5p | MIMAT0000093 | MIRT048755 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
