HCSGD entry for RIPPLY2
1. General information
| Official gene symbol | RIPPLY2 |
|---|---|
| Entrez ID | 134701 |
| Gene full name | ripply2 homolog (zebrafish) |
| Other gene symbols | C6orf159 dJ237I15.1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001503 | Ossification | IEA | biological_process |
| GO:0001756 | Somitogenesis | ISS | biological_process |
| GO:0005634 | Nucleus | ISS | cellular_component |
| GO:0007368 | Determination of left/right symmetry | IEA | biological_process |
| GO:0032525 | Somite rostral/caudal axis specification | ISS | biological_process |
| GO:0036342 | Post-anal tail morphogenesis | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7805637514 | 0.7466102504 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0798865222 |
| GSE13712_SHEAR | Up | 0.2397058217 |
| GSE13712_STATIC | Down | -0.1801759148 |
| GSE19018 | Up | 0.1672325449 |
| GSE19899_A1 | Up | 0.1076447936 |
| GSE19899_A2 | Down | -0.1618005056 |
| PubMed_21979375_A1 | Up | 0.0010506563 |
| PubMed_21979375_A2 | Down | -0.0755700564 |
| GSE35957 | Up | 0.0358073354 |
| GSE36640 | Up | 0.0588682672 |
| GSE54402 | Down | -0.0427905569 |
| GSE9593 | Down | -0.0255437227 |
| GSE43922 | Up | 0.0248724801 |
| GSE24585 | Down | -0.0745031750 |
| GSE37065 | Up | 0.0022983370 |
| GSE28863_A1 | Down | -0.1039535259 |
| GSE28863_A2 | Up | 0.1667265123 |
| GSE28863_A3 | Up | 0.1897476629 |
| GSE28863_A4 | Down | -0.1894722884 |
| GSE48662 | Up | 0.0055809789 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT016780 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
