HCSGD entry for APOBEC3D
1. General information
| Official gene symbol | APOBEC3D |
|---|---|
| Entrez ID | 140564 |
| Gene full name | apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D |
| Other gene symbols | A3D APOBEC3DE APOBEC3E ARP6 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000932 | Cytoplasmic mRNA processing body | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0010529 | Negative regulation of transposition | IDA | biological_process |
| GO:0016814 | Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEA | molecular_function |
| GO:0045087 | Innate immune response | IEA | biological_process |
| GO:0045869 | Negative regulation of single stranded viral RNA replication via double stranded DNA intermediate | IDA | biological_process |
| GO:0051607 | Defense response to virus | IDA | biological_process |
| GO:0070383 | DNA cytosine deamination | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1434935147 | 0.3549049998 | 0.7582599478 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0462137687 |
| GSE13712_SHEAR | Up | 0.0917002816 |
| GSE13712_STATIC | Down | -0.0639758542 |
| GSE19018 | Up | 0.0925996231 |
| GSE19899_A1 | Up | 0.3303782515 |
| GSE19899_A2 | Up | 0.1438000422 |
| PubMed_21979375_A1 | Down | -0.3977223598 |
| PubMed_21979375_A2 | Up | 0.0828115224 |
| GSE35957 | Up | 0.1194628874 |
| GSE36640 | Up | 0.0181352320 |
| GSE54402 | Down | -0.3247786912 |
| GSE9593 | Down | -0.0318133305 |
| GSE43922 | Down | -0.3886547913 |
| GSE24585 | Up | 1.0293261811 |
| GSE37065 | Up | 0.3322415413 |
| GSE28863_A1 | Down | -0.3311871647 |
| GSE28863_A2 | Up | 0.5851379985 |
| GSE28863_A3 | Down | -0.6468328374 |
| GSE28863_A4 | Up | 0.2466091114 |
| GSE48662 | Up | 0.0477191442 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
