HCSGD entry for RIMS4
1. General information
| Official gene symbol | RIMS4 |
|---|---|
| Entrez ID | 140730 |
| Gene full name | regulating synaptic membrane exocytosis 4 |
| Other gene symbols | C20orf190 RIM 4 RIM-4 RIM4 RIM4-gamma RIM4gamma |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0006836 | Neurotransmitter transport | IEA | biological_process |
| GO:0006887 | Exocytosis | IEA | biological_process |
| GO:0030054 | Cell junction | IEA | cellular_component |
| GO:0042391 | Regulation of membrane potential | IEA | biological_process |
| GO:0044325 | Ion channel binding | IEA | molecular_function |
| GO:0097060 | Synaptic membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7303627712 | 0.5688715930 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0324932772 |
| GSE13712_SHEAR | Down | -0.1675272722 |
| GSE13712_STATIC | Down | -0.0816284172 |
| GSE19018 | Up | 0.1692155155 |
| GSE19899_A1 | Down | -0.0866498305 |
| GSE19899_A2 | Up | 0.2032303582 |
| PubMed_21979375_A1 | Down | -0.2102255132 |
| PubMed_21979375_A2 | Up | 0.0456210571 |
| GSE35957 | Up | 0.2890801641 |
| GSE36640 | Down | -0.0023078475 |
| GSE54402 | Up | 0.0070262119 |
| GSE9593 | Up | 0.0088197667 |
| GSE43922 | Up | 0.0494164641 |
| GSE24585 | Down | -0.1689812094 |
| GSE37065 | Down | -0.0957184814 |
| GSE28863_A1 | Down | -0.1978168770 |
| GSE28863_A2 | Up | 0.0113896335 |
| GSE28863_A3 | Up | 0.3726187452 |
| GSE28863_A4 | Up | 0.0652188803 |
| GSE48662 | Down | -0.1078197586 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-186-5p | MIMAT0000456 | MIRT021146 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-125b-5p | MIMAT0000423 | MIRT046080 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
