HCSGD entry for C8orf48

1. General information

Official gene symbolC8orf48
Entrez ID157773
Gene full namechromosome 8 open reading frame 48
Other gene symbols
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005515Protein bindingIPImolecular_function
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.73346773300.02280630680.99999024730.2904135462

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.1187291269
GSE13712_SHEARDown-0.5805787648
GSE13712_STATICUp0.2565797311
GSE19018Down-0.0690427535
GSE19899_A1Down-0.1855702535
GSE19899_A2Down-1.6212006166
PubMed_21979375_A1Up0.6336744610
PubMed_21979375_A2Down-1.1156719628
GSE35957Down-1.2451294343
GSE36640Down-0.5736993034
GSE54402Down-0.1867819860
GSE9593Down-0.4647498144
GSE43922Up0.0536483751
GSE24585Up0.6661601693
GSE37065Up0.1599707094
GSE28863_A1Down-0.2233261775
GSE28863_A2Up0.0083049333
GSE28863_A3Down-0.0842100610
GSE28863_A4Up0.0690846558
GSE48662Down-0.3253721713

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: 1 abstracts the gene occurs.


PubMed ID of the article

Sentenece the gene occurs

24496748Additionally, expression analysis identified PLEC, C8orf48, TRPC4, and ZNF14, as differentially regulated genes in senescent hMSCs that were similarly regulated in those hMSCs which failed to produce a therapeutic effect in a GVHD trial
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