HCSGD entry for TVP23C
1. General information
| Official gene symbol | TVP23C |
|---|---|
| Entrez ID | 201158 |
| Gene full name | trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
| Other gene symbols | FAM18B2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3587229551 | 0.0558345770 | 0.9999902473 | 0.4445282734 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1327798742 |
| GSE13712_SHEAR | Up | 0.3758548134 |
| GSE13712_STATIC | Up | 0.1495337180 |
| GSE19018 | Up | 0.0692160303 |
| GSE19899_A1 | Up | 0.0458039746 |
| GSE19899_A2 | Down | -0.0429831070 |
| PubMed_21979375_A1 | Down | -1.0128085804 |
| PubMed_21979375_A2 | Up | 0.4468816947 |
| GSE35957 | Down | -0.0804843595 |
| GSE36640 | Up | 0.6983759408 |
| GSE54402 | Down | -0.3217060786 |
| GSE9593 | Down | -0.0230119148 |
| GSE43922 | Up | 0.0239799624 |
| GSE24585 | Down | -0.0359311487 |
| GSE37065 | Up | 0.0216189469 |
| GSE28863_A1 | Up | 0.6791349472 |
| GSE28863_A2 | Down | -1.5866142047 |
| GSE28863_A3 | Down | -0.1390652829 |
| GSE28863_A4 | Down | -0.2597112879 |
| GSE48662 | Down | -0.4775777420 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018348 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
