HCSGD entry for SLC39A11
1. General information
| Official gene symbol | SLC39A11 |
|---|---|
| Entrez ID | 201266 |
| Gene full name | solute carrier family 39 (metal ion transporter), member 11 |
| Other gene symbols | C17orf26 ZIP11 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0006829 | Zinc ion transport | IEA | biological_process |
| GO:0016020 | Membrane | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0046873 | Metal ion transmembrane transporter activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6569774287 | 0.0108604574 | 0.9999902473 | 0.2064739568 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1862895087 |
| GSE13712_SHEAR | Down | -0.2269631479 |
| GSE13712_STATIC | Up | 0.2053382354 |
| GSE19018 | Down | -0.5239946572 |
| GSE19899_A1 | Down | -0.7278194090 |
| GSE19899_A2 | Down | -2.3551521401 |
| PubMed_21979375_A1 | Down | -2.9149100204 |
| PubMed_21979375_A2 | Down | -1.9920870998 |
| GSE35957 | Down | -0.3877787578 |
| GSE36640 | Up | 1.4534171607 |
| GSE54402 | Down | -0.8406696183 |
| GSE9593 | Up | 0.4349034608 |
| GSE43922 | Down | -0.1282559721 |
| GSE24585 | Down | -0.1303987331 |
| GSE37065 | Up | 0.2503740561 |
| GSE28863_A1 | Down | -0.1082798138 |
| GSE28863_A2 | Up | 0.1060362047 |
| GSE28863_A3 | Down | -0.2029103793 |
| GSE28863_A4 | Up | 0.1941740372 |
| GSE48662 | Up | 0.1728034832 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-148b-3p | MIMAT0000759 | MIRT019384 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-375 | MIMAT0000728 | MIRT019808 | Microarray | Functional MTI (Weak) | 20215506 |
| hsa-miR-128-3p | MIMAT0000424 | MIRT021987 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT022609 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-7-5p | MIMAT0000252 | MIRT025772 | Microarray | Functional MTI (Weak) | 17612493 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
