HCSGD entry for RDM1
1. General information
| Official gene symbol | RDM1 |
|---|---|
| Entrez ID | 201299 |
| Gene full name | RAD52 motif 1 |
| Other gene symbols | RAD52B |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000166 | Nucleotide binding | IEA | molecular_function |
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0006281 | DNA repair | IEA | biological_process |
| GO:0006310 | DNA recombination | IEA | biological_process |
| GO:0015030 | Cajal body | IEA | cellular_component |
| GO:0016605 | PML body | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8274670339 | 0.6212184681 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0432843219 |
| GSE13712_SHEAR | Down | -0.2811518960 |
| GSE13712_STATIC | Down | -0.1941970471 |
| GSE19018 | Down | -0.0032051097 |
| GSE19899_A1 | Up | 0.0291345495 |
| GSE19899_A2 | Up | 0.1837993388 |
| PubMed_21979375_A1 | Up | 0.0467052062 |
| PubMed_21979375_A2 | Down | -0.3170902214 |
| GSE35957 | Down | -0.0127815248 |
| GSE36640 | Down | -0.1859503789 |
| GSE54402 | Down | -0.0545048588 |
| GSE9593 | Up | 0.2406221914 |
| GSE43922 | Up | 0.0561925060 |
| GSE24585 | Up | 0.2943277613 |
| GSE37065 | Up | 0.0118958066 |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Down | -0.1067285245 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-215-5p | MIMAT0000272 | MIRT024931 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026561 | Microarray | Functional MTI (Weak) | 19074876 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
