HCSGD entry for ANKRD28
1. General information
| Official gene symbol | ANKRD28 |
|---|---|
| Entrez ID | 23243 |
| Gene full name | ankyrin repeat domain 28 |
| Other gene symbols | PITK PPP1R65 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005654 | Nucleoplasm | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9481305270 | 0.0040364538 | 0.9999902473 | 0.1290929526 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1604376122 |
| GSE13712_SHEAR | Up | 0.0208653795 |
| GSE13712_STATIC | Down | -0.5960989172 |
| GSE19018 | Up | 0.6043574154 |
| GSE19899_A1 | Down | -0.7108024509 |
| GSE19899_A2 | Down | -1.9956741280 |
| PubMed_21979375_A1 | Down | -1.3994004787 |
| PubMed_21979375_A2 | Down | -0.9242864320 |
| GSE35957 | Down | -0.8193996699 |
| GSE36640 | Down | -1.0124434070 |
| GSE54402 | Down | -0.6657295304 |
| GSE9593 | Up | 0.1231947456 |
| GSE43922 | Down | -1.0457756113 |
| GSE24585 | Down | -0.0962648704 |
| GSE37065 | Up | 0.0250288632 |
| GSE28863_A1 | Down | -0.2666310534 |
| GSE28863_A2 | Up | 0.3359791637 |
| GSE28863_A3 | Down | -0.5607199656 |
| GSE28863_A4 | Down | -0.0500906136 |
| GSE48662 | Down | -0.1139284528 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-132-3p | MIMAT0000426 | MIRT021749 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-21-5p | MIMAT0000076 | MIRT030731 | Microarray | Functional MTI (Weak) | 18591254 |
| hsa-miR-221-3p | MIMAT0000278 | MIRT046912 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
