HCSGD entry for NCS1
1. General information
| Official gene symbol | NCS1 |
|---|---|
| Entrez ID | 23413 |
| Gene full name | neuronal calcium sensor 1 |
| Other gene symbols | FLUP FREQ |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000287 | Magnesium ion binding | IEA | molecular_function |
| GO:0005245 | Voltage-gated calcium channel activity | ISS | molecular_function |
| GO:0005509 | Calcium ion binding | TAS | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005829 | Cytosol | IEA | cellular_component |
| GO:0005886 | Plasma membrane | IDA | cellular_component |
| GO:0006810 | Transport | ISS | biological_process |
| GO:0006812 | Cation transport | ISS | biological_process |
| GO:0010975 | Regulation of neuron projection development | ISS | biological_process |
| GO:0014069 | Postsynaptic density | IEA | cellular_component |
| GO:0019901 | Protein kinase binding | IEA | molecular_function |
| GO:0030001 | Metal ion transport | ISS | biological_process |
| GO:0030054 | Cell junction | IEA | cellular_component |
| GO:0030424 | Axon | IEA | cellular_component |
| GO:0030425 | Dendrite | IEA | cellular_component |
| GO:0031410 | Cytoplasmic vesicle | IEA | cellular_component |
| GO:0032580 | Golgi cisterna membrane | IEA | cellular_component |
| GO:0034220 | Ion transmembrane transport | ISS | biological_process |
| GO:0034765 | Regulation of ion transmembrane transport | ISS | biological_process |
| GO:0043231 | Intracellular membrane-bounded organelle | IDA | cellular_component |
| GO:0045211 | Postsynaptic membrane | IEA | cellular_component |
| GO:0045921 | Positive regulation of exocytosis | IEA | biological_process |
| GO:0048015 | Phosphatidylinositol-mediated signaling | IEA | biological_process |
| GO:0048471 | Perinuclear region of cytoplasm | IEA | cellular_component |
| GO:0055085 | Transmembrane transport | ISS | biological_process |
| GO:0070588 | Calcium ion transmembrane transport | ISS | biological_process |
| GO:0072511 | Divalent inorganic cation transport | ISS | biological_process |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3818959956 | 0.1101267961 | 0.9999902473 | 0.6353416831 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1757949405 |
| GSE13712_SHEAR | Up | 0.1241562698 |
| GSE13712_STATIC | Up | 0.1347778452 |
| GSE19018 | Down | -0.1269481353 |
| GSE19899_A1 | Down | -0.1800242451 |
| GSE19899_A2 | Up | 0.5273813646 |
| PubMed_21979375_A1 | Down | -0.1188326829 |
| PubMed_21979375_A2 | Up | 0.4216449885 |
| GSE35957 | Down | -0.3333750224 |
| GSE36640 | Down | -0.1641412622 |
| GSE54402 | Up | 0.6726658957 |
| GSE9593 | Up | 0.1103304388 |
| GSE43922 | Up | 0.0045867434 |
| GSE24585 | Down | -0.7348698928 |
| GSE37065 | Down | -0.2129216095 |
| GSE28863_A1 | Down | -0.4694436381 |
| GSE28863_A2 | Down | -0.2789989394 |
| GSE28863_A3 | Down | -0.2653032569 |
| GSE28863_A4 | Up | 0.0683498178 |
| GSE48662 | Up | 0.2423581983 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-148b-3p | MIMAT0000759 | MIRT019373 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-132-3p | MIMAT0000426 | MIRT021815 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-1 | MIMAT0000416 | MIRT023761 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-744-5p | MIMAT0004945 | MIRT037529 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-484 | MIMAT0002174 | MIRT042108 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-331-3p | MIMAT0000760 | MIRT043430 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-330-3p | MIMAT0000751 | MIRT043837 | CLASH | Functional MTI (Weak) | 23622248 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
