HCSGD entry for LRRC8B
1. General information
| Official gene symbol | LRRC8B |
|---|---|
| Entrez ID | 23507 |
| Gene full name | leucine rich repeat containing 8 family, member B |
| Other gene symbols | TA-LRRP TALRRP |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4487004863 | 0.6636342730 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0224539238 |
| GSE13712_SHEAR | Up | 0.1858181908 |
| GSE13712_STATIC | Up | 0.0292737809 |
| GSE19018 | Down | -0.4327487111 |
| GSE19899_A1 | Up | 0.1176398744 |
| GSE19899_A2 | Down | -0.2526196683 |
| PubMed_21979375_A1 | Up | 0.4737369822 |
| PubMed_21979375_A2 | Up | 0.3609332327 |
| GSE35957 | Down | -0.0698144685 |
| GSE36640 | Down | -0.1472221230 |
| GSE54402 | Up | 0.1644344935 |
| GSE9593 | Up | 0.1427658297 |
| GSE43922 | Up | 0.1676011559 |
| GSE24585 | Down | -0.1156335990 |
| GSE37065 | Up | 0.0697083525 |
| GSE28863_A1 | Down | -0.1154102547 |
| GSE28863_A2 | Up | 0.2304965430 |
| GSE28863_A3 | Up | 0.0328240066 |
| GSE28863_A4 | Down | -0.0641001642 |
| GSE48662 | Down | -0.0485586583 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1 | MIMAT0000416 | MIRT024032 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-423-3p | MIMAT0001340 | MIRT042533 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
