HCSGD entry for TMEM9
1. General information
| Official gene symbol | TMEM9 |
|---|---|
| Entrez ID | 252839 |
| Gene full name | transmembrane protein 9 |
| Other gene symbols | TMEM9A |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003674 | Molecular_function | ND | molecular_function |
| GO:0005764 | Lysosome | IDA | cellular_component |
| GO:0005765 | Lysosomal membrane | IEA | cellular_component |
| GO:0005770 | Late endosome | IDA | cellular_component |
| GO:0006810 | Transport | IEA | biological_process |
| GO:0008150 | Biological_process | ND | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0031902 | Late endosome membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5865459519 | 0.2156928460 | 0.9999902473 | 0.8952380104 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0534980858 |
| GSE13712_SHEAR | Down | -0.4118562472 |
| GSE13712_STATIC | Down | -0.0818522395 |
| GSE19018 | Up | 0.4344192910 |
| GSE19899_A1 | Down | -0.8593709168 |
| GSE19899_A2 | Up | 0.1229682660 |
| PubMed_21979375_A1 | Up | 0.1705905704 |
| PubMed_21979375_A2 | Down | -1.0900756053 |
| GSE35957 | Down | -0.6315713280 |
| GSE36640 | Down | -0.0305333775 |
| GSE54402 | Down | -0.1071786637 |
| GSE9593 | Down | -0.1047319719 |
| GSE43922 | Up | 0.0385309369 |
| GSE24585 | Up | 0.0472377359 |
| GSE37065 | Up | 0.0611479805 |
| GSE28863_A1 | Up | 0.1735179875 |
| GSE28863_A2 | Up | 0.3247576059 |
| GSE28863_A3 | Up | 0.1799077278 |
| GSE28863_A4 | Down | -0.0071285204 |
| GSE48662 | Up | 0.2191238714 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-125b-5p | MIMAT0000423 | MIRT046083 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-17-5p | MIMAT0000070 | MIRT050914 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
