HCSGD entry for TBC1D28
1. General information
| Official gene symbol | TBC1D28 |
|---|---|
| Entrez ID | 254272 |
| Gene full name | TBC1 domain family, member 28 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005097 | Rab GTPase activator activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8178439193 | 0.1900219597 | 0.9999902473 | 0.8451449814 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1303521229 |
| GSE13712_SHEAR | Down | -0.0870643307 |
| GSE13712_STATIC | Down | -0.0450969708 |
| GSE19018 | Up | 0.0310957200 |
| GSE19899_A1 | Up | 0.0560885661 |
| GSE19899_A2 | Up | 0.0798958472 |
| PubMed_21979375_A1 | Down | -0.2178164767 |
| PubMed_21979375_A2 | Up | 0.1814509559 |
| GSE35957 | Down | -0.0464827002 |
| GSE36640 | Up | 0.0783951077 |
| GSE54402 | Down | -0.0287939487 |
| GSE9593 | Down | -0.0734789329 |
| GSE43922 | - | - |
| GSE24585 | - | - |
| GSE37065 | - | - |
| GSE28863_A1 | Down | -0.1471033499 |
| GSE28863_A2 | Down | -0.1900340221 |
| GSE28863_A3 | Down | -0.3770096786 |
| GSE28863_A4 | Down | -0.4327202198 |
| GSE48662 | Down | -0.0281084601 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017743 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
