HCSGD entry for PCDH17

1. General information

Official gene symbolPCDH17
Entrez ID27253
Gene full nameprotocadherin 17
Other gene symbolsPCDH68 PCH68
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005509Calcium ion bindingIEAmolecular_function
GO:0005515Protein bindingIPImolecular_function
GO:0005886Plasma membraneIEAcellular_component
GO:0007156Homophilic cell adhesionIEAbiological_process
GO:0016021Integral component of membraneIEAcellular_component
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.47685624790.36007250100.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0018780095
GSE13712_SHEARDown-2.3613290484
GSE13712_STATICDown-1.0468778551
GSE19018Up0.0492076546
GSE19899_A1Up0.1521158802
GSE19899_A2Up0.1349552312
PubMed_21979375_A1Up0.5091286153
PubMed_21979375_A2Up0.1841190667
GSE35957Up0.1274670112
GSE36640Down-0.0432426225
GSE54402Up0.1859233270
GSE9593Down-0.0588305814
GSE43922Up0.0305126664
GSE24585Down-0.0871776727
GSE37065Up0.1379719310
GSE28863_A1Down-0.1249613904
GSE28863_A2Down-0.0640967284
GSE28863_A3Up0.3140873712
GSE28863_A4Up0.2433922144
GSE48662Up0.0005254567

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.