HCSGD entry for HTATSF1
1. General information
| Official gene symbol | HTATSF1 |
|---|---|
| Entrez ID | 27336 |
| Gene full name | HIV-1 Tat specific factor 1 |
| Other gene symbols | TAT-SF1 TATSF1 dJ196E23.2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000166 | Nucleotide binding | IEA | molecular_function |
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006357 | Regulation of transcription from RNA polymerase II promoter | TAS | biological_process |
| GO:0019079 | Viral genome replication | TAS | biological_process |
| GO:0032784 | Regulation of DNA-templated transcription, elongation | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7482214354 | 0.1420855477 | 0.9999902473 | 0.7251960054 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1767451739 |
| GSE13712_SHEAR | Up | 0.0267817854 |
| GSE13712_STATIC | Up | 0.0574714338 |
| GSE19018 | Down | -0.1390695272 |
| GSE19899_A1 | Down | -0.1386663057 |
| GSE19899_A2 | Down | -0.7694684948 |
| PubMed_21979375_A1 | Down | -0.3957538794 |
| PubMed_21979375_A2 | Down | -0.7895299414 |
| GSE35957 | Down | -0.1160348981 |
| GSE36640 | Down | -0.2288812903 |
| GSE54402 | Up | 0.0802372005 |
| GSE9593 | Up | 0.0771459405 |
| GSE43922 | Down | -0.0818872494 |
| GSE24585 | Down | -0.3821725790 |
| GSE37065 | Up | 0.0100995708 |
| GSE28863_A1 | Up | 0.0151370948 |
| GSE28863_A2 | Up | 0.1756229011 |
| GSE28863_A3 | Up | 0.5812477316 |
| GSE28863_A4 | Up | 0.0913226811 |
| GSE48662 | Down | -0.2021818665 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-877-3p | MIMAT0004950 | MIRT036920 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
