HCSGD entry for C16orf54
1. General information
| Official gene symbol | C16orf54 |
|---|---|
| Entrez ID | 283897 |
| Gene full name | chromosome 16 open reading frame 54 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2787284564 | 0.7538811557 | 0.9757915824 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0183351772 |
| GSE13712_SHEAR | Down | -0.0371113520 |
| GSE13712_STATIC | Down | -0.0408927187 |
| GSE19018 | Up | 0.2397743153 |
| GSE19899_A1 | Up | 0.1033564564 |
| GSE19899_A2 | Down | -0.2904735192 |
| PubMed_21979375_A1 | Up | 0.2612958616 |
| PubMed_21979375_A2 | Up | 0.0816868487 |
| GSE35957 | Down | -0.0272920191 |
| GSE36640 | Down | -0.0398381301 |
| GSE54402 | Up | 0.0793242042 |
| GSE9593 | Up | 0.0531244242 |
| GSE43922 | Up | 0.0314988587 |
| GSE24585 | Up | 0.0580414529 |
| GSE37065 | Down | -0.0646189049 |
| GSE28863_A1 | Up | 0.0521851018 |
| GSE28863_A2 | Down | -0.2117088808 |
| GSE28863_A3 | Up | 0.3298540088 |
| GSE28863_A4 | Up | 0.2888365689 |
| GSE48662 | Up | 0.0070535762 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017944 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
