HCSGD entry for RGMB
1. General information
| Official gene symbol | RGMB |
|---|---|
| Entrez ID | 285704 |
| Gene full name | RGM domain family, member B |
| Other gene symbols | DRAGON |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005793 | Endoplasmic reticulum-Golgi intermediate compartment | IEA ISS | cellular_component |
| GO:0007155 | Cell adhesion | IEA ISS | biological_process |
| GO:0007165 | Signal transduction | ISS | biological_process |
| GO:0007411 | Axon guidance | TAS | biological_process |
| GO:0030509 | BMP signaling pathway | IEA ISS | biological_process |
| GO:0042802 | Identical protein binding | IEA ISS | molecular_function |
| GO:0045121 | Membrane raft | IEA | cellular_component |
| GO:0045893 | Positive regulation of transcription, DNA-templated | IEA ISS | biological_process |
| GO:0046658 | Anchored component of plasma membrane | IEA ISS | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0899798830 | 0.0118393754 | 0.6303860793 | 0.2147651275 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.8466169949 |
| GSE13712_SHEAR | Up | 0.6099923452 |
| GSE13712_STATIC | Up | 0.3221215260 |
| GSE19018 | Down | -0.0927042108 |
| GSE19899_A1 | Down | -1.1362826876 |
| GSE19899_A2 | Down | -0.6042191899 |
| PubMed_21979375_A1 | Down | -2.1015998352 |
| PubMed_21979375_A2 | Down | -1.3451442203 |
| GSE35957 | Up | 0.8486110473 |
| GSE36640 | Up | 0.1927356621 |
| GSE54402 | Down | -0.4897653984 |
| GSE9593 | Up | 2.0483097186 |
| GSE43922 | Down | -0.8156360756 |
| GSE24585 | Down | -0.5928874717 |
| GSE37065 | Down | -0.4589351698 |
| GSE28863_A1 | Up | 0.0320842621 |
| GSE28863_A2 | Up | 1.1254025946 |
| GSE28863_A3 | Down | -0.2147577214 |
| GSE28863_A4 | Down | -0.3545230602 |
| GSE48662 | Down | -0.1432101025 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-769-5p | MIMAT0003886 | MIRT016098 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-421 | MIMAT0003339 | MIRT016114 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-30b-5p | MIMAT0000420 | MIRT023409 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-130b-3p | MIMAT0000691 | MIRT044170 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-27b-3p | MIMAT0000419 | MIRT046176 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
