HCSGD entry for SNX15
1. General information
| Official gene symbol | SNX15 |
|---|---|
| Entrez ID | 29907 |
| Gene full name | sorting nexin 15 |
| Other gene symbols | HSAF001435 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005829 | Cytosol | NAS | cellular_component |
| GO:0006886 | Intracellular protein transport | NAS | biological_process |
| GO:0007154 | Cell communication | IEA | biological_process |
| GO:0016020 | Membrane | NAS | cellular_component |
| GO:0030659 | Cytoplasmic vesicle membrane | IEA | cellular_component |
| GO:0035091 | Phosphatidylinositol binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9829699214 | 0.0904683713 | 0.9999902473 | 0.5715837734 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1169519747 |
| GSE13712_SHEAR | Down | -0.1633520921 |
| GSE13712_STATIC | Down | -0.0742125008 |
| GSE19018 | Down | -0.0651128903 |
| GSE19899_A1 | Down | -0.1728952702 |
| GSE19899_A2 | Down | -0.0236092669 |
| PubMed_21979375_A1 | Down | -0.5112476405 |
| PubMed_21979375_A2 | Down | -0.7318781482 |
| GSE35957 | Down | -0.6196363916 |
| GSE36640 | Down | -0.2748410838 |
| GSE54402 | Down | -0.0437603786 |
| GSE9593 | Down | -0.1720161227 |
| GSE43922 | - | - |
| GSE24585 | - | - |
| GSE37065 | - | - |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Down | -0.0357973832 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-16-5p | MIMAT0000069 | MIRT001477 | Proteomics | Functional MTI (Weak) | 18668040 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
