HCSGD entry for HOXA10
1. General information
| Official gene symbol | HOXA10 |
|---|---|
| Entrez ID | 3206 |
| Gene full name | homeobox A10 |
| Other gene symbols | HOX1 HOX1.8 HOX1H PL |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001501 | Skeletal system development | IEA | biological_process |
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005667 | Transcription factor complex | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0007275 | Multicellular organismal development | TAS | biological_process |
| GO:0007283 | Spermatogenesis | TAS | biological_process |
| GO:0009952 | Anterior/posterior pattern specification | IEA | biological_process |
| GO:0009954 | Proximal/distal pattern formation | IEA | biological_process |
| GO:0030326 | Embryonic limb morphogenesis | IEA | biological_process |
| GO:0043565 | Sequence-specific DNA binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2345018882 | 0.6500228639 | 0.9176338037 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1134930487 |
| GSE13712_SHEAR | Up | 0.2002479912 |
| GSE13712_STATIC | Down | -0.2475065874 |
| GSE19018 | Up | 0.1425018749 |
| GSE19899_A1 | Up | 0.0897101677 |
| GSE19899_A2 | Up | 0.0822581855 |
| PubMed_21979375_A1 | Down | -0.1469654073 |
| PubMed_21979375_A2 | Down | -0.1736990968 |
| GSE35957 | Down | -0.5770738884 |
| GSE36640 | Down | -0.0522705394 |
| GSE54402 | Up | 0.0387218307 |
| GSE9593 | Down | -0.5097607014 |
| GSE43922 | Up | 0.1510275397 |
| GSE24585 | Up | 1.0537929632 |
| GSE37065 | Down | -0.0312601086 |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Up | 0.6650213547 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-204-5p | MIMAT0000265 | MIRT000190 | Microarray//Western blot | Functional MTI | 18308931 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT004850 | Luciferase reporter assay//qRT-PCR | Functional MTI | 19074876 |
| hsa-miR-130a-3p | MIMAT0000425 | MIRT005441 | Luciferase reporter assay//Microarray//qRT-PCR | Functional MTI | 20981674 |
| hsa-miR-215-5p | MIMAT0000272 | MIRT024822 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-320a | MIMAT0000510 | MIRT044613 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-149-5p | MIMAT0000450 | MIRT045606 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
