HCSGD entry for WASH3P
1. General information
| Official gene symbol | WASH3P |
|---|---|
| Entrez ID | 374666 |
| Gene full name | WAS protein family homolog 3 pseudogene |
| Other gene symbols | FAM39DP |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003779 | Actin binding | IEA | molecular_function |
| GO:0005769 | Early endosome | ISS | cellular_component |
| GO:0016197 | Endosomal transport | ISS | biological_process |
| GO:0030027 | Lamellipodium | IDA | cellular_component |
| GO:0030175 | Filopodium | IDA | cellular_component |
| GO:0031901 | Early endosome membrane | IEA | cellular_component |
| GO:0034314 | Arp2/3 complex-mediated actin nucleation | IDA | biological_process |
| GO:0042147 | Retrograde transport, endosome to Golgi | ISS | biological_process |
| GO:0043014 | Alpha-tubulin binding | ISS | molecular_function |
| GO:0055037 | Recycling endosome | ISS | cellular_component |
| GO:0055038 | Recycling endosome membrane | IEA | cellular_component |
| GO:0071203 | WASH complex | ISS | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8735724972 | 0.8846778808 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | - | - |
| GSE13712_SHEAR | - | - |
| GSE13712_STATIC | - | - |
| GSE19018 | - | - |
| GSE19899_A1 | - | - |
| GSE19899_A2 | - | - |
| PubMed_21979375_A1 | - | - |
| PubMed_21979375_A2 | - | - |
| GSE35957 | - | - |
| GSE36640 | - | - |
| GSE54402 | - | - |
| GSE9593 | - | - |
| GSE43922 | - | - |
| GSE24585 | - | - |
| GSE37065 | - | - |
| GSE28863_A1 | Up | 0.1316191814 |
| GSE28863_A2 | Up | 0.0445240934 |
| GSE28863_A3 | Down | -0.1302154756 |
| GSE28863_A4 | Down | -0.0415470395 |
| GSE48662 | Up | 0.0254558092 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-93-3p | MIMAT0004509 | MIRT038874 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-331-3p | MIMAT0000760 | MIRT043400 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-149-5p | MIMAT0000450 | MIRT045560 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-183-5p | MIMAT0000261 | MIRT047160 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
