HCSGD entry for FAM69A
1. General information
| Official gene symbol | FAM69A |
|---|---|
| Entrez ID | 388650 |
| Gene full name | family with sequence similarity 69, member A |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005789 | Endoplasmic reticulum membrane | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9421716006 | 0.0008918012 | 0.9999902473 | 0.0566338902 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.6711062649 |
| GSE13712_SHEAR | Down | -0.7625235911 |
| GSE13712_STATIC | Down | -0.2126693323 |
| GSE19018 | Up | 0.2080149161 |
| GSE19899_A1 | Down | -1.8102645440 |
| GSE19899_A2 | Down | -1.1243448725 |
| PubMed_21979375_A1 | Down | -0.5906046244 |
| PubMed_21979375_A2 | Down | -0.7287304248 |
| GSE35957 | Up | 0.1987257367 |
| GSE36640 | Down | -0.0557826899 |
| GSE54402 | Down | -1.6274134622 |
| GSE9593 | Up | 0.3049494851 |
| GSE43922 | Down | -0.5403766571 |
| GSE24585 | Up | 0.4538852826 |
| GSE37065 | Down | -0.0666395335 |
| GSE28863_A1 | Down | -0.3597807158 |
| GSE28863_A2 | Down | -0.0713225390 |
| GSE28863_A3 | Down | -1.0597084638 |
| GSE28863_A4 | Down | -0.6186893127 |
| GSE48662 | Up | 0.0744074052 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-15a-5p | MIMAT0000068 | MIRT003877 | Microarray | Functional MTI (Weak) | 18362358 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT004371 | Microarray | Functional MTI (Weak) | 18362358 |
| hsa-miR-98-5p | MIMAT0000096 | MIRT027701 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-27a-3p | MIMAT0000084 | MIRT028727 | Sequencing | Functional MTI (Weak) | 20371350 |
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- mirRecord
MicroRNA name | mirBase ID | Target site number | MiRNA mature ID | Test method inter | MiRNA regulation site | Reporter target site | Pubmed ID |
|---|---|---|---|---|---|---|---|
| hsa-miR-15a-5p | MIMAT0000068 | NA | hsa-miR-15a | 18362358 | |||
| hsa-miR-16-5p | MIMAT0000069 | NA | hsa-miR-16 | 18362358 |
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6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
