HCSGD entry for VGLL3
1. General information
| Official gene symbol | VGLL3 |
|---|---|
| Entrez ID | 389136 |
| Gene full name | vestigial like 3 (Drosophila) |
| Other gene symbols | VGL-3 VGL3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1267661829 | 0.0010049998 | 0.7256204733 | 0.0598475113 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -1.6159144999 |
| GSE13712_SHEAR | Up | 2.5113427044 |
| GSE13712_STATIC | Up | 1.4099259262 |
| GSE19018 | Down | -0.0709282925 |
| GSE19899_A1 | Down | -1.3809801662 |
| GSE19899_A2 | Down | -1.8310286370 |
| PubMed_21979375_A1 | Down | -1.5936558667 |
| PubMed_21979375_A2 | Down | -2.3727915547 |
| GSE35957 | Up | 1.0962623181 |
| GSE36640 | Up | 0.0363068793 |
| GSE54402 | Down | -1.7220779562 |
| GSE9593 | Up | 0.3586283401 |
| GSE43922 | Down | -0.8842864391 |
| GSE24585 | Down | -0.0322343087 |
| GSE37065 | Down | -0.9027374591 |
| GSE28863_A1 | Up | 0.4529246748 |
| GSE28863_A2 | Up | 0.5736996225 |
| GSE28863_A3 | Down | -0.7693449213 |
| GSE28863_A4 | Down | -0.5997349392 |
| GSE48662 | Up | 0.5635829617 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-192-5p | MIMAT0000222 | MIRT026549 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-98-5p | MIMAT0000096 | MIRT027671 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-24-3p | MIMAT0000080 | MIRT030546 | Sequencing | Functional MTI (Weak) | 20138800 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
