HCSGD entry for TM4SF1
1. General information
| Official gene symbol | TM4SF1 |
|---|---|
| Entrez ID | 4071 |
| Gene full name | transmembrane 4 L six family member 1 |
| Other gene symbols | H-L6 L6 M3S1 TAAL6 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003674 | Molecular_function | ND | molecular_function |
| GO:0005887 | Integral component of plasma membrane | IDA | cellular_component |
| GO:0008150 | Biological_process | ND | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2280643745 | 0.0618782645 | 0.9100124678 | 0.4693234955 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2015429446 |
| GSE13712_SHEAR | Down | -0.1541918897 |
| GSE13712_STATIC | Down | -0.3991988826 |
| GSE19018 | Down | -0.0839914392 |
| GSE19899_A1 | Down | -0.0699810274 |
| GSE19899_A2 | Down | -0.2861857163 |
| PubMed_21979375_A1 | Up | 0.5496002200 |
| PubMed_21979375_A2 | Up | 0.0513485195 |
| GSE35957 | Up | 0.2151582630 |
| GSE36640 | Up | 0.2789880869 |
| GSE54402 | Down | -0.7418900937 |
| GSE9593 | Up | 0.5602659736 |
| GSE43922 | Down | -0.0807516524 |
| GSE24585 | Down | -0.1310651773 |
| GSE37065 | Up | 0.3689734814 |
| GSE28863_A1 | Down | -0.2746740896 |
| GSE28863_A2 | Up | 0.9358362430 |
| GSE28863_A3 | Down | -1.2513082374 |
| GSE28863_A4 | Up | 0.0144482888 |
| GSE48662 | Up | 0.0489640030 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-128-3p | MIMAT0000424 | MIRT022021 | Microarray | Functional MTI (Weak) | 17612493 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: 1 abstracts the gene occurs.
PubMed ID of the article | Sentenece the gene occurs |
|---|---|
| 23466301 | In particular, the expression levels of 9 genes, HSP90B1, EID1, ATP2B4, DDAH1, PRNP, RAB1A, PGS5, TM4SF1 and SSR3, gradually increased during senescence |
Entries Per Page
Displaying Page of
