HCSGD entry for GALNT7
1. General information
| Official gene symbol | GALNT7 |
|---|---|
| Entrez ID | 51809 |
| Gene full name | UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7) |
| Other gene symbols | GALNAC-T7 GalNAcT7 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | TAS | cellular_component |
| GO:0004653 | Polypeptide N-acetylgalactosaminyltransferase activity | IEA | molecular_function |
| GO:0005794 | Golgi apparatus | IEA | cellular_component |
| GO:0005975 | Carbohydrate metabolic process | TAS | biological_process |
| GO:0006486 | Protein glycosylation | IEA | biological_process |
| GO:0006493 | Protein O-linked glycosylation | TAS | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0016266 | O-glycan processing | TAS | biological_process |
| GO:0016757 | Transferase activity, transferring glycosyl groups | IEA | molecular_function |
| GO:0043687 | Post-translational protein modification | TAS | biological_process |
| GO:0044267 | Cellular protein metabolic process | TAS | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8342418183 | 0.0128200030 | 0.9999902473 | 0.2236151756 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0513641238 |
| GSE13712_SHEAR | Up | 0.5673675237 |
| GSE13712_STATIC | Up | 0.4193003599 |
| GSE19018 | Up | 0.1354344798 |
| GSE19899_A1 | Down | -0.6071509294 |
| GSE19899_A2 | Down | -0.4152415209 |
| PubMed_21979375_A1 | Down | -0.5040808930 |
| PubMed_21979375_A2 | Down | -0.1118004619 |
| GSE35957 | Up | 0.1267875812 |
| GSE36640 | Down | -0.6979345552 |
| GSE54402 | Down | -1.3045712597 |
| GSE9593 | Up | 0.1076433406 |
| GSE43922 | Down | -0.3189746254 |
| GSE24585 | Down | -0.3849464069 |
| GSE37065 | Up | 0.4107667941 |
| GSE28863_A1 | Down | -0.4273146367 |
| GSE28863_A2 | Up | 0.0039499018 |
| GSE28863_A3 | Down | -0.9479904991 |
| GSE28863_A4 | Down | -0.1252647426 |
| GSE48662 | Down | -0.1533318251 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-16-5p | MIMAT0000069 | MIRT001466 | pSILAC//Proteomics;Other | Functional MTI (Weak) | 18668040 |
| hsa-miR-30a-5p | MIMAT0000087 | MIRT005150 | pSILAC//Proteomics;Other | Functional MTI (Weak) | 18668040 |
| hsa-miR-378a-3p | MIMAT0000732 | MIRT005424 | GFP reporter assay//Luciferase reporter assay//Western blot | Functional MTI | 19844573 |
| hsa-miR-214-3p | MIMAT0000271 | MIRT006816 | Microarray;Other | Functional MTI (Weak) | 19859982 |
| hsa-miR-374b-5p | MIMAT0004955 | MIRT016045 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT023185 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT030348 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-17-3p | MIMAT0000071 | MIRT035525 | Luciferase reporter assay | Functional MTI | 23418359 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
