HCSGD entry for GATAD2A
1. General information
| Official gene symbol | GATAD2A |
|---|---|
| Entrez ID | 54815 |
| Gene full name | GATA zinc finger domain containing 2A |
| Other gene symbols | p66alpha |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001568 | Blood vessel development | IEA | biological_process |
| GO:0001701 | In utero embryonic development | IEA | biological_process |
| GO:0001842 | Neural fold formation | IEA | biological_process |
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0006306 | DNA methylation | TAS | biological_process |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0010172 | Embryonic body morphogenesis | IEA | biological_process |
| GO:0012501 | Programmed cell death | IEA | biological_process |
| GO:0016581 | NuRD complex | IDA | cellular_component |
| GO:0016607 | Nuclear speck | IEA | cellular_component |
| GO:0021506 | Anterior neuropore closure | IEA | biological_process |
| GO:0030674 | Protein binding, bridging | IDA | molecular_function |
| GO:0043565 | Sequence-specific DNA binding | IEA | molecular_function |
| GO:0045892 | Negative regulation of transcription, DNA-templated | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0563903841 | 0.9642557198 | 0.5157231758 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2278275117 |
| GSE13712_SHEAR | Up | 0.1778168490 |
| GSE13712_STATIC | Up | 0.0889697212 |
| GSE19018 | Down | -0.1226674251 |
| GSE19899_A1 | Up | 0.2033589689 |
| GSE19899_A2 | Up | 0.7000718434 |
| PubMed_21979375_A1 | Up | 0.7280975711 |
| PubMed_21979375_A2 | Up | 0.5730985549 |
| GSE35957 | Down | -0.0698886260 |
| GSE36640 | Down | -0.2579622040 |
| GSE54402 | Up | 0.6163545126 |
| GSE9593 | Up | 0.1851211569 |
| GSE43922 | Up | 0.4814025781 |
| GSE24585 | Down | -0.2863652831 |
| GSE37065 | Down | -0.1987839897 |
| GSE28863_A1 | Up | 0.1017855573 |
| GSE28863_A2 | Up | 0.3282527471 |
| GSE28863_A3 | Up | 0.1143399165 |
| GSE28863_A4 | Up | 0.0566633316 |
| GSE48662 | Down | -0.0106077029 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-10a-5p | MIMAT0000253 | MIRT025615 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-103a-3p | MIMAT0000101 | MIRT027021 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-98-5p | MIMAT0000096 | MIRT027485 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT031446 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT039641 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92b-3p | MIMAT0003218 | MIRT040671 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049559 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
