HCSGD entry for STX17

1. General information

Official gene symbolSTX17
Entrez ID55014
Gene full namesyntaxin 17
Other gene symbols
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0000046Autophagic vacuole fusionIMPbiological_process
GO:0000149SNARE bindingIBA IDAmolecular_function
GO:0000421Autophagic vacuole membraneIDAcellular_component
GO:0005484SNAP receptor activityIBA IMPmolecular_function
GO:0005739MitochondrionIDAcellular_component
GO:0005765Lysosomal membraneIDAcellular_component
GO:0005789Endoplasmic reticulum membraneIDAcellular_component
GO:0005791Rough endoplasmic reticulumIDAcellular_component
GO:0005793Endoplasmic reticulum-Golgi intermediate compartmentIDA IEAcellular_component
GO:0005829CytosolIEA ISScellular_component
GO:0006886Intracellular protein transportIBAbiological_process
GO:0006887ExocytosisIBAbiological_process
GO:0006888ER to Golgi vesicle-mediated transportIMPbiological_process
GO:0007030Golgi organizationIMPbiological_process
GO:0012507ER to Golgi transport vesicle membraneIEAcellular_component
GO:0016020MembraneIEAcellular_component
GO:0016021Integral component of membraneIEAcellular_component
GO:0016192Vesicle-mediated transportIEAbiological_process
GO:0019901Protein kinase bindingIEAmolecular_function
GO:0019903Protein phosphatase bindingIPImolecular_function
GO:0030134ER to Golgi transport vesicleIEA ISScellular_component
GO:0030868Smooth endoplasmic reticulum membraneIEA ISScellular_component
GO:0031201SNARE complexIBA IDAcellular_component
GO:0033116Endoplasmic reticulum-Golgi intermediate compartment membraneIEAcellular_component
GO:0097111Endoplasmic reticulum-Golgi intermediate compartment organizationIMPbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.57977518710.29550493900.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0297313444
GSE13712_SHEARDown-0.1027273659
GSE13712_STATICUp0.3179981718
GSE19018Down-0.0859153582
GSE19899_A1Down-0.0407427580
GSE19899_A2Down-0.0392649044
PubMed_21979375_A1Down-0.8602082955
PubMed_21979375_A2Up0.4927092574
GSE35957Up0.0447468045
GSE36640Up0.3825798886
GSE54402Down-0.1645749749
GSE9593Down-0.0327802877
GSE43922Down-0.1942567391
GSE24585Up0.4244650509
GSE37065Up0.2824098844
GSE28863_A1Up0.0633494762
GSE28863_A2Down-0.1076985569
GSE28863_A3Down-0.7059181188
GSE28863_A4Down-0.0398945165
GSE48662Up0.0076472507

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-30b-5pMIMAT0000420MIRT046119CLASHFunctional MTI (Weak)23622248
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.