HCSGD entry for LRRC8D
1. General information
| Official gene symbol | LRRC8D |
|---|---|
| Entrez ID | 55144 |
| Gene full name | leucine rich repeat containing 8 family, member D |
| Other gene symbols | LRRC5 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2696847004 | 0.2621124881 | 0.9667790821 | 0.9832189655 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0267012200 |
| GSE13712_SHEAR | Up | 0.2557971848 |
| GSE13712_STATIC | Up | 0.2357064232 |
| GSE19018 | Down | -0.3030936348 |
| GSE19899_A1 | Down | -0.1402580560 |
| GSE19899_A2 | Down | -0.1853391340 |
| PubMed_21979375_A1 | Up | 0.9317378050 |
| PubMed_21979375_A2 | Up | 0.4893429173 |
| GSE35957 | Up | 0.1600795773 |
| GSE36640 | Down | -0.2089319497 |
| GSE54402 | Down | -0.6226214806 |
| GSE9593 | Up | 0.9096955644 |
| GSE43922 | Down | -0.0441754618 |
| GSE24585 | Up | 0.0715361960 |
| GSE37065 | Up | 0.0990245937 |
| GSE28863_A1 | Down | -0.2600521677 |
| GSE28863_A2 | Up | 0.2214995357 |
| GSE28863_A3 | Down | -0.3291955883 |
| GSE28863_A4 | Down | -0.0919136028 |
| GSE48662 | Down | -0.1723523038 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1 | MIMAT0000416 | MIRT023944 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029937 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-454-3p | MIMAT0003885 | MIRT039220 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT040025 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
