HCSGD entry for PACS1
1. General information
| Official gene symbol | PACS1 |
|---|---|
| Entrez ID | 55690 |
| Gene full name | phosphofurin acidic cluster sorting protein 1 |
| Other gene symbols | MRD17 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000042 | Protein targeting to Golgi | IEA | biological_process |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005829 | Cytosol | TAS | cellular_component |
| GO:0016032 | Viral process | TAS | biological_process |
| GO:0030137 | COPI-coated vesicle | IEA | cellular_component |
| GO:0044325 | Ion channel binding | IPI | molecular_function |
| GO:0050690 | Regulation of defense response to virus by virus | TAS | biological_process |
| GO:0072661 | Protein targeting to plasma membrane | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1443640439 | 0.4053913909 | 0.7618048478 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2862262485 |
| GSE13712_SHEAR | Up | 0.1760369578 |
| GSE13712_STATIC | Up | 0.3267026259 |
| GSE19018 | Up | 0.2869328031 |
| GSE19899_A1 | Down | -0.0365244077 |
| GSE19899_A2 | Up | 0.2083675131 |
| PubMed_21979375_A1 | Up | 0.3900546811 |
| PubMed_21979375_A2 | Up | 0.6276683931 |
| GSE35957 | Up | 0.1023232516 |
| GSE36640 | Up | 0.0231265784 |
| GSE54402 | Down | -0.1359469253 |
| GSE9593 | Up | 0.2584378266 |
| GSE43922 | Down | -0.2776660843 |
| GSE24585 | Up | 0.0734383808 |
| GSE37065 | Down | -0.3425887703 |
| GSE28863_A1 | Up | 0.4532466350 |
| GSE28863_A2 | Up | 0.4806798518 |
| GSE28863_A3 | Down | -0.2795601472 |
| GSE28863_A4 | Down | -0.2019013689 |
| GSE48662 | Up | 0.3165742543 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-324-5p | MIMAT0000761 | MIRT043109 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-320a | MIMAT0000510 | MIRT044795 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
