HCSGD entry for PRDM8
1. General information
| Official gene symbol | PRDM8 |
|---|---|
| Entrez ID | 56978 |
| Gene full name | PR domain containing 8 |
| Other gene symbols | PFM5 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0003682 | Chromatin binding | IEA | molecular_function |
| GO:0003714 | Transcription corepressor activity | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0021540 | Corpus callosum morphogenesis | IEA | biological_process |
| GO:0021957 | Corticospinal tract morphogenesis | IEA | biological_process |
| GO:0045892 | Negative regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
| GO:0046974 | Histone methyltransferase activity (H3-K9 specific) | IEA | molecular_function |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7809012651 | 0.4003692793 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0506566807 |
| GSE13712_SHEAR | Up | 0.0392946192 |
| GSE13712_STATIC | Up | 0.1099000598 |
| GSE19018 | Up | 0.2727533345 |
| GSE19899_A1 | Down | -0.0545343105 |
| GSE19899_A2 | Up | 0.0652635556 |
| PubMed_21979375_A1 | Down | -0.6303938780 |
| PubMed_21979375_A2 | Down | -0.1809556106 |
| GSE35957 | Down | -0.0604594915 |
| GSE36640 | Down | -0.8696952108 |
| GSE54402 | Down | -0.0806889951 |
| GSE9593 | Up | 0.0380613696 |
| GSE43922 | Down | -0.0591363992 |
| GSE24585 | Up | 0.1704951688 |
| GSE37065 | Up | 0.4076355665 |
| GSE28863_A1 | Up | 0.1452731120 |
| GSE28863_A2 | Up | 0.1798857225 |
| GSE28863_A3 | Down | -0.0455912251 |
| GSE28863_A4 | Up | 0.0433329709 |
| GSE48662 | Down | -0.2915314328 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-7-5p | MIMAT0000252 | MIRT025734 | Microarray | Functional MTI (Weak) | 17612493 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
