HCSGD entry for PCDH19

1. General information

Official gene symbolPCDH19
Entrez ID57526
Gene full nameprotocadherin 19
Other gene symbolsEFMR EIEE9
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005509Calcium ion bindingIEAmolecular_function
GO:0005886Plasma membraneIEAcellular_component
GO:0007156Homophilic cell adhesionIEAbiological_process
GO:0016021Integral component of membraneIEAcellular_component
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.69334202350.13479995820.99999024730.7079149441

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.2387619695
GSE13712_SHEARDown-2.2479535928
GSE13712_STATICDown-1.1239802693
GSE19018Down-0.0085844667
GSE19899_A1Up0.1314728085
GSE19899_A2Down-0.1105609483
PubMed_21979375_A1Up0.1342038901
PubMed_21979375_A2Up0.0315227272
GSE35957Down-0.3104616328
GSE36640Up0.0380982184
GSE54402Up0.3209342621
GSE9593Down-0.1070359705
GSE43922Up0.0069805863
GSE24585Down-0.1590929947
GSE37065Down-0.0397956629
GSE28863_A1Down-0.1184457122
GSE28863_A2Down-0.1436386471
GSE28863_A3Up0.1341559399
GSE28863_A4Down-0.0279340269
GSE48662Up0.7592674775

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.