HCSGD entry for RAD23A
1. General information
| Official gene symbol | RAD23A |
|---|---|
| Entrez ID | 5886 |
| Gene full name | RAD23 homolog A (S. cerevisiae) |
| Other gene symbols | HHR23A HR23A |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000502 | Proteasome complex | IEA | cellular_component |
| GO:0003684 | Damaged DNA binding | IEA | molecular_function |
| GO:0003697 | Single-stranded DNA binding | TAS | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006289 | Nucleotide-excision repair | IDA IEA | biological_process |
| GO:0006974 | Cellular response to DNA damage stimulus | IEA | biological_process |
| GO:0016032 | Viral process | IEA | biological_process |
| GO:0031593 | Polyubiquitin binding | IDA | molecular_function |
| GO:0032434 | Regulation of proteasomal ubiquitin-dependent protein catabolic process | IDA | biological_process |
| GO:0043161 | Proteasome-mediated ubiquitin-dependent protein catabolic process | IEA | biological_process |
| GO:0045070 | Positive regulation of viral genome replication | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2649469397 | 0.3231806656 | 0.9598898170 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2520090264 |
| GSE13712_SHEAR | Up | 0.0214170814 |
| GSE13712_STATIC | Down | -0.0750075397 |
| GSE19018 | Up | 0.2688075442 |
| GSE19899_A1 | Down | -0.4965479269 |
| GSE19899_A2 | Up | 0.0103922057 |
| PubMed_21979375_A1 | Down | -0.2510272402 |
| PubMed_21979375_A2 | Down | -0.0912029961 |
| GSE35957 | Down | -0.3712076537 |
| GSE36640 | Down | -0.2647130369 |
| GSE54402 | Up | 0.2085935664 |
| GSE9593 | Up | 0.0935533577 |
| GSE43922 | Down | -0.3088668963 |
| GSE24585 | Down | -0.4039385337 |
| GSE37065 | Down | -0.1376763143 |
| GSE28863_A1 | Up | 0.3131503714 |
| GSE28863_A2 | Up | 0.2781929238 |
| GSE28863_A3 | Up | 0.7678614015 |
| GSE28863_A4 | Up | 0.0863476442 |
| GSE48662 | Down | -0.0507360355 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-455-3p | MIMAT0004784 | MIRT037882 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT040146 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-324-3p | MIMAT0000762 | MIRT042965 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-320a | MIMAT0000510 | MIRT044607 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
