HCSGD entry for RPL7
1. General information
| Official gene symbol | RPL7 |
|---|---|
| Entrez ID | 6129 |
| Gene full name | ribosomal protein L7 |
| Other gene symbols | L7 humL7-1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000184 | Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | TAS | biological_process |
| GO:0003677 | DNA binding | IDA | molecular_function |
| GO:0003723 | RNA binding | TAS | molecular_function |
| GO:0003729 | MRNA binding | IDA | molecular_function |
| GO:0003735 | Structural constituent of ribosome | NAS | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005829 | Cytosol | TAS | cellular_component |
| GO:0006364 | RRNA processing | IMP | biological_process |
| GO:0006412 | Translation | NAS TAS | biological_process |
| GO:0006413 | Translational initiation | TAS | biological_process |
| GO:0006414 | Translational elongation | TAS | biological_process |
| GO:0006415 | Translational termination | TAS | biological_process |
| GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | TAS | biological_process |
| GO:0010467 | Gene expression | TAS | biological_process |
| GO:0016032 | Viral process | TAS | biological_process |
| GO:0016070 | RNA metabolic process | TAS | biological_process |
| GO:0016071 | MRNA metabolic process | TAS | biological_process |
| GO:0019058 | Viral life cycle | TAS | biological_process |
| GO:0019083 | Viral transcription | TAS | biological_process |
| GO:0022625 | Cytosolic large ribosomal subunit | IDA IEA | cellular_component |
| GO:0030529 | Ribonucleoprotein complex | IDA | cellular_component |
| GO:0042273 | Ribosomal large subunit biogenesis | IMP | biological_process |
| GO:0042803 | Protein homodimerization activity | IPI | molecular_function |
| GO:0044267 | Cellular protein metabolic process | TAS | biological_process |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9788395502 | 0.1215446070 | 0.9999902473 | 0.6700246028 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0083137619 |
| GSE13712_SHEAR | Down | -0.1455787503 |
| GSE13712_STATIC | Down | -0.2140682297 |
| GSE19018 | Down | -0.1722224729 |
| GSE19899_A1 | Down | -0.0231075513 |
| GSE19899_A2 | Down | -0.1764673394 |
| PubMed_21979375_A1 | Down | -0.2464968471 |
| PubMed_21979375_A2 | Down | -0.0468712247 |
| GSE35957 | Up | 0.0330146608 |
| GSE36640 | Down | -0.2257017452 |
| GSE54402 | Up | 0.1227105913 |
| GSE9593 | Down | -0.0511791684 |
| GSE43922 | Down | -0.0533678167 |
| GSE24585 | Down | -0.1203188905 |
| GSE37065 | Down | -0.6771385361 |
| GSE28863_A1 | Down | -0.0298666709 |
| GSE28863_A2 | Down | -0.0983823091 |
| GSE28863_A3 | Up | 0.0646709877 |
| GSE28863_A4 | Down | -0.0093268858 |
| GSE48662 | Down | -0.3214803554 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-615-3p | MIMAT0003283 | MIRT040053 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-106b-5p | MIMAT0000680 | MIRT044249 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-132-3p | MIMAT0000426 | MIRT045839 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-100-5p | MIMAT0000098 | MIRT048570 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-17-5p | MIMAT0000070 | MIRT050872 | CLASH | Functional MTI (Weak) | 23622248 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
