HCSGD entry for RPS19

1. General information

Official gene symbolRPS19
Entrez ID6223
Gene full nameribosomal protein S19
Other gene symbolsDBA DBA1 S19
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0000028Ribosomal small subunit assemblyIMPbiological_process
GO:0000184Nuclear-transcribed mRNA catabolic process, nonsense-mediated decayTASbiological_process
GO:0000462Maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)IMPbiological_process
GO:0002548Monocyte chemotaxisIDAbiological_process
GO:0003735Structural constituent of ribosomeIDA IEAmolecular_function
GO:0005515Protein bindingIPImolecular_function
GO:0005730NucleolusIDAcellular_component
GO:0005737CytoplasmIDAcellular_component
GO:0005829CytosolIDA TAScellular_component
GO:0005840RibosomeIDA IEAcellular_component
GO:0006364RRNA processingIMPbiological_process
GO:0006412TranslationIC IEA TASbiological_process
GO:0006413Translational initiationTASbiological_process
GO:0006414Translational elongationTASbiological_process
GO:0006415Translational terminationTASbiological_process
GO:0006614SRP-dependent cotranslational protein targeting to membraneTASbiological_process
GO:0007000Nucleolus organizationIMPbiological_process
GO:0009991Response to extracellular stimulusTASbiological_process
GO:0010467Gene expressionTASbiological_process
GO:0016032Viral processTASbiological_process
GO:0016070RNA metabolic processTASbiological_process
GO:0016071MRNA metabolic processTASbiological_process
GO:0017134Fibroblast growth factor bindingIPImolecular_function
GO:0019058Viral life cycleTASbiological_process
GO:0019083Viral transcriptionTASbiological_process
GO:0019901Protein kinase bindingIPImolecular_function
GO:0022627Cytosolic small ribosomal subunitIDAcellular_component
GO:0030218Erythrocyte differentiationIMPbiological_process
GO:0030490Maturation of SSU-rRNAIMPbiological_process
GO:0042274Ribosomal small subunit biogenesisIMPbiological_process
GO:0042803Protein homodimerization activityIDAmolecular_function
GO:0044267Cellular protein metabolic processTASbiological_process
GO:0051262Protein tetramerizationIDAbiological_process
GO:0051272Positive regulation of cellular component movementTASbiological_process
GO:0060265Positive regulation of respiratory burst involved in inflammatory responseIDAbiological_process
GO:0060266Negative regulation of respiratory burst involved in inflammatory responseIDAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.84004658640.51934314050.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0279906536
GSE13712_SHEARDown-0.0806418159
GSE13712_STATICUp0.0655516455
GSE19018Up0.2424997871
GSE19899_A1Down-0.0406025688
GSE19899_A2Down-0.0361888564
PubMed_21979375_A1Up0.6842993457
PubMed_21979375_A2Up0.0075316824
GSE35957Down-0.2096013521
GSE36640Up0.1303993071
GSE54402Down-0.0180741183
GSE9593Up0.0222774981
GSE43922Up0.0506255307
GSE24585Down-0.0261278523
GSE37065Down-0.2532540852
GSE28863_A1Down-0.0930726210
GSE28863_A2Down-0.2771110655
GSE28863_A3Down-0.0169349182
GSE28863_A4Up0.1765449599
GSE48662Down-0.4042490176

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-193b-5pMIMAT0004767MIRT038007CLASHFunctional MTI (Weak)23622248
hsa-miR-501-5pMIMAT0002872MIRT041145CLASHFunctional MTI (Weak)23622248
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.