HCSGD entry for SNRPG

1. General information

Official gene symbolSNRPG
Entrez ID6637
Gene full namesmall nuclear ribonucleoprotein polypeptide G
Other gene symbolsSMG Sm-G
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0000245Spliceosomal complex assemblyNASbiological_process
GO:0000387Spliceosomal snRNP assemblyIDA TASbiological_process
GO:0000398MRNA splicing, via spliceosomeIC TASbiological_process
GO:0003723RNA bindingIEAmolecular_function
GO:0005515Protein bindingIPImolecular_function
GO:0005654NucleoplasmTAScellular_component
GO:0005681Spliceosomal complexTAScellular_component
GO:0005683U7 snRNPIDAcellular_component
GO:0005685U1 snRNPIDAcellular_component
GO:0005687U4 snRNPIDAcellular_component
GO:0005689U12-type spliceosomal complexIDAcellular_component
GO:0005829CytosolIDA TAScellular_component
GO:0006366Transcription from RNA polymerase II promoterTASbiological_process
GO:0006369Termination of RNA polymerase II transcriptionTASbiological_process
GO:0008334Histone mRNA metabolic processTASbiological_process
GO:0008380RNA splicingTASbiological_process
GO:0010467Gene expressionTASbiological_process
GO:0016070RNA metabolic processTASbiological_process
GO:0030532Small nuclear ribonucleoprotein complexNAScellular_component
GO:0031124MRNA 3'-end processingTASbiological_process
GO:0034660NcRNA metabolic processTASbiological_process
GO:0034709MethylosomeIDAcellular_component
GO:0034719SMN-Sm protein complexIDAcellular_component
GO:0071013Catalytic step 2 spliceosomeIDAcellular_component
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.96339079060.06778528550.99999024730.4915461157

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0255802791
GSE13712_SHEARDown-0.0417466674
GSE13712_STATICUp0.0611131711
GSE19018Down-0.3031002455
GSE19899_A1Down-0.1589677489
GSE19899_A2Down-0.1645924911
PubMed_21979375_A1Up0.0525434336
PubMed_21979375_A2Up0.1761946574
GSE35957Down-0.7325126874
GSE36640Down-0.6862964297
GSE54402Up0.1997406965
GSE9593Down-0.6239824498
GSE43922Up0.0640261330
GSE24585Down-0.6328010586
GSE37065Up0.0098734198
GSE28863_A1--
GSE28863_A2--
GSE28863_A3--
GSE28863_A4--
GSE48662Down-0.1804567083

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-320aMIMAT0000510MIRT044593CLASHFunctional MTI (Weak)23622248
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.