HCSGD entry for XIST
1. General information
| Official gene symbol | XIST |
|---|---|
| Entrez ID | 7503 |
| Gene full name | X inactive specific transcript (non-protein coding) |
| Other gene symbols | DXS1089 DXS399E LINC00001 NCRNA00001 SXI1 swd66 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
Not in the Gene ontology4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7590644162 | 0.0222192698 | 0.9999902473 | 0.2864271659 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0006338083 |
| GSE13712_SHEAR | Down | -0.2191598117 |
| GSE13712_STATIC | Down | -0.1375334820 |
| GSE19018 | Down | -0.6582202061 |
| GSE19899_A1 | Down | -0.7939134826 |
| GSE19899_A2 | Down | -1.2375929593 |
| PubMed_21979375_A1 | Down | -1.4389177406 |
| PubMed_21979375_A2 | Down | -0.5192457552 |
| GSE35957 | Up | 0.9903206313 |
| GSE36640 | Down | -0.5243942424 |
| GSE54402 | Down | -0.3540659695 |
| GSE9593 | Up | 0.0735523993 |
| GSE43922 | - | - |
| GSE24585 | - | - |
| GSE37065 | - | - |
| GSE28863_A1 | Up | 0.7633785391 |
| GSE28863_A2 | Up | 0.0565172801 |
| GSE28863_A3 | Up | 0.0449377483 |
| GSE28863_A4 | Down | -0.0233674276 |
| GSE48662 | Up | 0.2593484121 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-210-3p | MIMAT0000267 | MIRT003171 | immunoprecipitaion//Luciferase reporter assay//Microarray//qRT-PCR | Functional MTI | 19826008 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
