HCSGD entry for BRPF1
1. General information
| Official gene symbol | BRPF1 |
|---|---|
| Entrez ID | 7862 |
| Gene full name | bromodomain and PHD finger containing, 1 |
| Other gene symbols | BR140 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005886 | Plasma membrane | IDA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0043966 | Histone H3 acetylation | IDA | biological_process |
| GO:0045893 | Positive regulation of transcription, DNA-templated | IDA | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
| GO:0070776 | MOZ/MORF histone acetyltransferase complex | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4347625394 | 0.4946737662 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1584988550 |
| GSE13712_SHEAR | Down | -0.2693812118 |
| GSE13712_STATIC | Down | -0.1881171190 |
| GSE19018 | Down | -0.3080505935 |
| GSE19899_A1 | Up | 0.1771516003 |
| GSE19899_A2 | Down | -0.2385063333 |
| PubMed_21979375_A1 | Down | -0.0027095725 |
| PubMed_21979375_A2 | Up | 0.6612923365 |
| GSE35957 | Down | -0.3510896604 |
| GSE36640 | Down | -0.4342264476 |
| GSE54402 | Up | 0.2799768350 |
| GSE9593 | Down | -0.1332065974 |
| GSE43922 | Up | 0.0933922536 |
| GSE24585 | Up | 0.0621495712 |
| GSE37065 | Down | -0.0611595159 |
| GSE28863_A1 | Up | 0.3580704439 |
| GSE28863_A2 | Up | 0.2846426166 |
| GSE28863_A3 | Down | -0.0696530428 |
| GSE28863_A4 | Down | -0.1947148173 |
| GSE48662 | Down | -0.0314334821 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-331-3p | MIMAT0000760 | MIRT043564 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-183-5p | MIMAT0000261 | MIRT047074 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-17-3p | MIMAT0000071 | MIRT050786 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT052041 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
