HCSGD entry for EFHD2
1. General information
| Official gene symbol | EFHD2 |
|---|---|
| Entrez ID | 79180 |
| Gene full name | EF-hand domain family, member D2 |
| Other gene symbols | SWS1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005509 | Calcium ion binding | IEA | molecular_function |
| GO:0045121 | Membrane raft | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0182307473 | 0.2420422286 | 0.3302403026 | 0.9477526778 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2203710704 |
| GSE13712_SHEAR | Up | 0.3506762800 |
| GSE13712_STATIC | Up | 0.3762454547 |
| GSE19018 | Down | -0.2349579495 |
| GSE19899_A1 | Up | 1.3402849918 |
| GSE19899_A2 | Up | 1.3073620870 |
| PubMed_21979375_A1 | Up | 1.3250284721 |
| PubMed_21979375_A2 | Up | 1.9697607033 |
| GSE35957 | Down | -1.0532260839 |
| GSE36640 | Down | -0.2568427641 |
| GSE54402 | Up | 0.5591882142 |
| GSE9593 | Down | -0.1983007402 |
| GSE43922 | Up | 0.3772407123 |
| GSE24585 | Down | -0.5976035731 |
| GSE37065 | Down | -0.2075396234 |
| GSE28863_A1 | Down | -0.3288280676 |
| GSE28863_A2 | Down | -0.0147180758 |
| GSE28863_A3 | Down | -0.1952483358 |
| GSE28863_A4 | Up | 0.0162338303 |
| GSE48662 | Down | -0.4882859139 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-340-5p | MIMAT0004692 | MIRT019574 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT022800 | Proteomics;Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-34a-5p | MIMAT0000255 | MIRT025488 | Proteomics | Functional MTI (Weak) | 21566225 |
| hsa-miR-7-5p | MIMAT0000252 | MIRT025836 | Microarray | Functional MTI (Weak) | 19073608 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
