HCSGD entry for FAT4
1. General information
| Official gene symbol | FAT4 |
|---|---|
| Entrez ID | 79633 |
| Gene full name | FAT atypical cadherin 4 |
| Other gene symbols | CDHF14 CDHR11 FAT-J FATJ NBLA00548 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005509 | Calcium ion binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0007156 | Homophilic cell adhesion | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1573426428 | 0.0002287299 | 0.7874911010 | 0.0265215859 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -1.4895000304 |
| GSE13712_SHEAR | Down | -0.1874857877 |
| GSE13712_STATIC | Down | -0.9501049185 |
| GSE19018 | Down | -0.0085166475 |
| GSE19899_A1 | Down | -1.6037809396 |
| GSE19899_A2 | Down | -3.1317098385 |
| PubMed_21979375_A1 | Down | -1.6430647469 |
| PubMed_21979375_A2 | Down | -2.4763321107 |
| GSE35957 | Up | 0.9144976027 |
| GSE36640 | Up | 1.3744835498 |
| GSE54402 | Down | -3.3632304720 |
| GSE9593 | Down | -0.0468349165 |
| GSE43922 | Down | -1.9316696323 |
| GSE24585 | Down | -0.0262014465 |
| GSE37065 | Up | 0.2749755728 |
| GSE28863_A1 | Up | 1.4373515225 |
| GSE28863_A2 | Up | 0.8293846411 |
| GSE28863_A3 | Up | 0.2580614776 |
| GSE28863_A4 | Down | -1.1110459816 |
| GSE48662 | Down | -0.5077565235 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-132-3p | MIMAT0000426 | MIRT021819 | Microarray | Functional MTI (Weak) | 17612493 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
