HCSGD entry for PPP1R3B
1. General information
| Official gene symbol | PPP1R3B |
|---|---|
| Entrez ID | 79660 |
| Gene full name | protein phosphatase 1, regulatory subunit 3B |
| Other gene symbols | GL PPP1R4 PTG |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000164 | Protein phosphatase type 1 complex | IEA | cellular_component |
| GO:0005977 | Glycogen metabolic process | IEA | biological_process |
| GO:0005979 | Regulation of glycogen biosynthetic process | IEA | biological_process |
| GO:0005981 | Regulation of glycogen catabolic process | IDA | biological_process |
| GO:0019888 | Protein phosphatase regulator activity | IEA | molecular_function |
| GO:0019899 | Enzyme binding | IEA | molecular_function |
| GO:0042587 | Glycogen granule | IEA | cellular_component |
| GO:0043231 | Intracellular membrane-bounded organelle | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7409113294 | 0.0781427263 | 0.9999902473 | 0.5289078169 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -1.0245860812 |
| GSE13712_SHEAR | Down | -0.1223048902 |
| GSE13712_STATIC | Down | -0.0618048107 |
| GSE19018 | Up | 0.2737021836 |
| GSE19899_A1 | Down | -0.0724614756 |
| GSE19899_A2 | Down | -0.6367267444 |
| PubMed_21979375_A1 | Down | -0.4729287337 |
| PubMed_21979375_A2 | Down | -0.1712885454 |
| GSE35957 | Up | 0.3583061944 |
| GSE36640 | Down | -0.0004629709 |
| GSE54402 | Down | -0.2388915498 |
| GSE9593 | Up | 0.4595579512 |
| GSE43922 | Down | -0.2105180113 |
| GSE24585 | Up | 0.1174556358 |
| GSE37065 | Down | -0.3091687366 |
| GSE28863_A1 | Up | 0.1026086809 |
| GSE28863_A2 | Up | 0.4676741758 |
| GSE28863_A3 | Up | 0.0524890777 |
| GSE28863_A4 | Down | -0.1390381507 |
| GSE48662 | Down | -0.0289273179 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017328 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT022373 | Microarray | Functional MTI (Weak) | 18668037 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
