HCSGD entry for CLMN
1. General information
| Official gene symbol | CLMN |
|---|---|
| Entrez ID | 79789 |
| Gene full name | calmin (calponin-like, transmembrane) |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003779 | Actin binding | IEA | molecular_function |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0008285 | Negative regulation of cell proliferation | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0031175 | Neuron projection development | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8020373314 | 0.4897394666 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0560668220 |
| GSE13712_SHEAR | Down | -0.2925410169 |
| GSE13712_STATIC | Down | -0.3141010422 |
| GSE19018 | Up | 0.0277390369 |
| GSE19899_A1 | Up | 0.0910976872 |
| GSE19899_A2 | Up | 0.0336467560 |
| PubMed_21979375_A1 | Up | 0.1827555613 |
| PubMed_21979375_A2 | Down | -0.0496751204 |
| GSE35957 | Down | -0.0837220647 |
| GSE36640 | Up | 0.0193982375 |
| GSE54402 | Down | -0.0316888309 |
| GSE9593 | Up | 0.0016099682 |
| GSE43922 | Up | 0.0440624930 |
| GSE24585 | Down | -0.3960162094 |
| GSE37065 | Down | -0.1209168995 |
| GSE28863_A1 | Down | -0.1312196653 |
| GSE28863_A2 | Up | 0.5551903305 |
| GSE28863_A3 | Up | 0.0626821123 |
| GSE28863_A4 | Up | 0.0765169621 |
| GSE48662 | Up | 0.1025180545 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017270 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
