HCSGD entry for SLTM


1. General information

Official gene symbolSLTM
Entrez ID79811
Gene full nameSAFB-like, transcription modulator
Other gene symbolsMet
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0000166Nucleotide bindingIEAmolecular_function
GO:0003676Nucleic acid bindingIEAmolecular_function
GO:0003723RNA bindingIEAmolecular_function
GO:0005634NucleusIDAcellular_component
GO:0005730NucleolusIDAcellular_component
GO:0006351Transcription, DNA-templatedIEAbiological_process
GO:0006355Regulation of transcription, DNA-templatedIEAbiological_process
GO:0006915Apoptotic processIEAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.29942343000.62361910640.99874846031.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.1853738501
GSE13712_SHEARUp0.1149322932
GSE13712_STATICUp0.0029537998
GSE19018Down-0.3389484217
GSE19899_A1Up0.0639386166
GSE19899_A2Up0.2030657548
PubMed_21979375_A1Up0.4254331050
PubMed_21979375_A2Down-0.2134241849
GSE35957Down-0.0544251952
GSE36640Down-0.4021917122
GSE54402Up0.1856925730
GSE9593Down-0.2570749547
GSE43922Up0.0238198089
GSE24585Up0.0831190055
GSE37065Up0.1425182833
GSE28863_A1Up0.4653524453
GSE28863_A2Up0.1801472775
GSE28863_A3Down-0.1277811721
GSE28863_A4Up0.2101044782
GSE48662Down-0.1210481616

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-186-5pMIMAT0000456MIRT021156SequencingFunctional MTI (Weak)20371350
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.