HCSGD entry for CNTNAP3
1. General information
| Official gene symbol | CNTNAP3 |
|---|---|
| Entrez ID | 79937 |
| Gene full name | contactin associated protein-like 3 |
| Other gene symbols | CASPR3 CNTNAP3A RP11-138L21.1 RP11-290L7.1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005576 | Extracellular region | IEA | cellular_component |
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0007155 | Cell adhesion | IEA | biological_process |
| GO:0008037 | Cell recognition | NAS | biological_process |
| GO:0016021 | Integral component of membrane | NAS | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6711881425 | 0.4014637514 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0769802917 |
| GSE13712_SHEAR | Down | -0.2505284047 |
| GSE13712_STATIC | Down | -0.4280825265 |
| GSE19018 | Up | 0.0493054440 |
| GSE19899_A1 | Down | -0.0155529243 |
| GSE19899_A2 | Up | 0.1172151791 |
| PubMed_21979375_A1 | Down | -0.0036708686 |
| PubMed_21979375_A2 | Up | 0.1672569478 |
| GSE35957 | Down | -0.0613270431 |
| GSE36640 | Down | -0.2113815195 |
| GSE54402 | Up | 0.3324397437 |
| GSE9593 | Up | 0.1419873638 |
| GSE43922 | - | - |
| GSE24585 | - | - |
| GSE37065 | - | - |
| GSE28863_A1 | Down | -0.1829538938 |
| GSE28863_A2 | Up | 0.0817043321 |
| GSE28863_A3 | Up | 0.1020500430 |
| GSE28863_A4 | Down | -0.1613098842 |
| GSE48662 | Down | -0.1605976639 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017267 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-215-5p | MIMAT0000272 | MIRT024558 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026349 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-1226-3p | MIMAT0005577 | MIRT036519 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
