HCSGD entry for CPEB4
1. General information
| Official gene symbol | CPEB4 |
|---|---|
| Entrez ID | 80315 |
| Gene full name | cytoplasmic polyadenylation element binding protein 4 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000166 | Nucleotide binding | IEA | molecular_function |
| GO:0002931 | Response to ischemia | ISS | biological_process |
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA ISS | cellular_component |
| GO:0005737 | Cytoplasm | IDA ISS | cellular_component |
| GO:0005783 | Endoplasmic reticulum | ISS | cellular_component |
| GO:0014069 | Postsynaptic density | ISS | cellular_component |
| GO:0030425 | Dendrite | ISS | cellular_component |
| GO:0035235 | Ionotropic glutamate receptor signaling pathway | ISS | biological_process |
| GO:0036294 | Cellular response to decreased oxygen levels | ISS | biological_process |
| GO:0042149 | Cellular response to glucose starvation | ISS | biological_process |
| GO:0043524 | Negative regulation of neuron apoptotic process | ISS | biological_process |
| GO:0071230 | Cellular response to amino acid stimulus | ISS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0014443144 | 0.9593182212 | 0.1024684636 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0533434795 |
| GSE13712_SHEAR | Up | 0.7110801595 |
| GSE13712_STATIC | Up | 0.2658967937 |
| GSE19018 | Down | -0.2462242110 |
| GSE19899_A1 | Up | 0.7937115813 |
| GSE19899_A2 | Up | 0.9148546612 |
| PubMed_21979375_A1 | Up | 1.0966864653 |
| PubMed_21979375_A2 | Up | 1.4744041461 |
| GSE35957 | Up | 0.4327194349 |
| GSE36640 | Up | 1.0107474816 |
| GSE54402 | Up | 0.8094672949 |
| GSE9593 | Up | 0.7892126586 |
| GSE43922 | Up | 1.0049406209 |
| GSE24585 | Up | 0.2791370525 |
| GSE37065 | Up | 0.6109060651 |
| GSE28863_A1 | Down | -0.0633419739 |
| GSE28863_A2 | Up | 0.1473477659 |
| GSE28863_A3 | Down | -0.6269689428 |
| GSE28863_A4 | Down | -0.1034766875 |
| GSE48662 | Up | 0.2644103901 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26a-5p | MIMAT0000082 | MIRT005589 | Luciferase reporter assay//Northern blot//qRT-PCR | Functional MTI | 20660482 |
| hsa-miR-29a-3p | MIMAT0000086 | MIRT005592 | Luciferase reporter assay//Northern blot//qRT-PCR | Functional MTI | 20660482 |
| hsa-miR-145-5p | MIMAT0000437 | MIRT005689 | Luciferase reporter assay | Non-Functional MTI | 20737575 |
| hsa-miR-335-5p | MIMAT0000765 | MIRT018743 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-128-3p | MIMAT0000424 | MIRT022065 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-32-5p | MIMAT0000090 | MIRT028380 | Sequencing | Functional MTI (Weak) | 20371350 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
